STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0572Hypothetical protein. (257 aa)    
Predicted Functional Partners:
nrfA
Probable catalytic subunit of cytochrome c nitrite reductase; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
  
  
  0.911
DP3075
Hypothetical membrane protein.
    
  0.902
DP0343
Probable small subunit of cytochrome c nitrite reductase.
     
  0.900
DP0573
Probable polyA polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.809
DP2550
Related to malonyl CoA-acyl carrier protein transacylase.
 
  
 0.723
DP1019
Conserved hypothetical iron-sulfur protein.
    
   0.673
acpP-2
Probable acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.652
DP1813
Related to acetyl-coenzyme A carboxylase (fusion of alpha and beta subunit).
  
  
 0.571
DP1840
Related to 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.515
DP0914
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
  
  
 0.477
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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