STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0597Probable DctP (periplasmic C4-dicarboxylate binding protein). (332 aa)    
Predicted Functional Partners:
DP0595
Probable DctM (C4-dicarboxylate permease, large subunit).
    0.961
DP0596
Probable DctQ (C4-dicarboxylate permease, small subunit).
 
  
 0.923
DP3053
Probable DctMQ fusion protein (C4-dicarboxylate transporter).
  
 0.907
DP1512
Probable DctM (C4-dicarboxylate permease, large subunit).
    0.906
DP1187
Probable DctM (C4-dicarboxylate permease, large subunit).
    0.886
DP0446
Probable C4-dicarboxylate permease (large subunit), probably cold-shock inducible.
    0.875
DP0487
Probable DctM (C4-dicarboxylate permease, large subunit).
    0.847
DP0484
Probable DctM (C4-dicarboxylate permease, large subunit).
    0.836
DP1511
Probable DctQ (C4-dicarboxylate permease, small subunit).
 
  
 0.817
DP1188
Probable DctQ (C4-dicarboxylate permease, small subunit).
 
  
 0.816
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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