STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0683Probable NADP-reducing hydrogenase, 51 kDa subunit. (634 aa)    
Predicted Functional Partners:
DP0684
Probable NADH-ubiquinone oxidoreductase, 24 kDa subunit.
 0.999
DP1310
Probable NADH dehydrogenase, subunit 4.
  
 0.999
DP1311
Probable NADH dehydrogenase, subunit 4.
  
 0.999
DP2210
Probable hydrogenase, chain U.
 
 0.998
DP2208
Probable NADH dehydrogenase (ubiquinone) I, chain E.
 0.997
DP0682
Probable formate dehydrogenase, alpha chain.
 
 0.996
nuoH
Probable NADH dehydrogenase, subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
  
 0.996
DP0893
Probable glutamate synthase, small chain.
 
 0.995
DP2209
Probable NADH dehydrogenase (ubiquinone) I, chain F.
 
0.995
DP1319
Probable NADH dehydrogenase, subunit 9.
  
 0.994
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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