STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0720Hypothetical protein. (422 aa)    
Predicted Functional Partners:
DP1793
Related to two-component system sensory/regulatory protein (hybrid family).
  
 
 0.978
DP2292
Related to two-component system sensory/regulatory protein (hybrid family).
  
 
 0.946
DP0883
Related to two-component system sensory/regulatory protein (hybrid family).
  
 
 0.944
DP0717
Conserved hypothetical protein.
    
  0.932
DP3116
Probable pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.929
DP1285
Related to nitrogen assimilation regulatory protein.
 
 0.918
ndk
Probable nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.917
DP1165
Probable GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.906
DP1405
Hypothetical protein.
     
 0.906
DP1905
Probable GTP pyrophosphokinase.
     
 0.906
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.