STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0804Unknown protein. (388 aa)    
Predicted Functional Partners:
DP2360
Related to methyl-accepting chemotaxis protein.
 
 
 0.739
DP0068
Unknown protein.
  
     0.714
DP2361
Unknown protein.
  
     0.709
DP0112
Related to fimbrial assembly protein PilQ [Precursor].
  
 
   0.685
DP2359
Related to purine-binding chemotaxis protein.
  
     0.628
DP1692
Hypothetical protein.
  
 
   0.623
DP2889
Related to two-component system response regulator (Che family).
 
 
 
 0.605
DP1793
Related to two-component system sensory/regulatory protein (hybrid family).
 
 
 0.603
DP1675
Related to penicillin-binding protein 1A.
 
     0.597
DP2190
Hypothetical protein.
  
     0.588
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.