Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DP0602 | DP1734 | DP0602 | DP1734 | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | 0.999 |
DP0602 | DP2824 | DP0602 | DP2824 | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | Probable delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.996 |
DP0602 | DP3081 | DP0602 | DP3081 | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | Related to siroheme synthase. | 0.931 |
DP0602 | hemA | DP0602 | DP3079 | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | Related to glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.994 |
DP0602 | hemE | DP0602 | DP1280 | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | Probable uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.990 |
DP0602 | hemL | DP0602 | DP0812 | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | Probable glutamate-1-semialdehyde 2,1-aminomutase. | 0.953 |
DP0813 | DP0814 | DP0813 | DP0814 | Unknown protein. | Unknown protein. | 0.943 |
DP0813 | atpB | DP0813 | DP0815 | Unknown protein. | Probable ATP synthase, A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.855 |
DP0813 | hemL | DP0813 | DP0812 | Unknown protein. | Probable glutamate-1-semialdehyde 2,1-aminomutase. | 0.743 |
DP0814 | DP0813 | DP0814 | DP0813 | Unknown protein. | Unknown protein. | 0.943 |
DP0814 | atpB | DP0814 | DP0815 | Unknown protein. | Probable ATP synthase, A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.980 |
DP0814 | hemL | DP0814 | DP0812 | Unknown protein. | Probable glutamate-1-semialdehyde 2,1-aminomutase. | 0.706 |
DP1734 | DP0602 | DP1734 | DP0602 | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.999 |
DP1734 | DP2824 | DP1734 | DP2824 | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | Probable delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.999 |
DP1734 | DP3081 | DP1734 | DP3081 | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | Related to siroheme synthase. | 0.999 |
DP1734 | hemA | DP1734 | DP3079 | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | Related to glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.962 |
DP1734 | hemE | DP1734 | DP1280 | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | Probable uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.971 |
DP1734 | hemL | DP1734 | DP0812 | Probable uroporphyrinogen III synthase/methyltransferase (HemD+CobA). | Probable glutamate-1-semialdehyde 2,1-aminomutase. | 0.919 |
DP2788 | hemL | DP2788 | DP0812 | Probable 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Probable glutamate-1-semialdehyde 2,1-aminomutase. | 0.671 |
DP2824 | DP0602 | DP2824 | DP0602 | Probable delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. | 0.996 |
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