STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0873Conserved hypothetical membrane protein. (306 aa)    
Predicted Functional Partners:
DP1985
Similar to deca-heme c-type cytochrome.
 
 
 0.711
pfor
Probable pyruvate-flavodoxin oxidoreductase.
 
 
 0.579
DP1772
Related to polyferredoxins.
 
 
 0.572
DP2624
Related to glutamate synthase, beta subunit.
  
 
 0.466
DP0343
Probable small subunit of cytochrome c nitrite reductase.
 
 
 0.461
DP0893
Probable glutamate synthase, small chain.
  
 
 0.461
DP2230
Probable nitrogen fixation protein (NifU); May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.429
DP1471
Probable heavy-metal transporting ATPase.
  
  
 0.428
DP2623
Related to glutamate synthase, alpha subunit.
  
 
 0.424
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.