STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0893Probable glutamate synthase, small chain. (587 aa)    
Predicted Functional Partners:
DP2209
Probable NADH dehydrogenase (ubiquinone) I, chain F.
 
 0.999
DP0683
Probable NADP-reducing hydrogenase, 51 kDa subunit.
 
 0.995
DP2210
Probable hydrogenase, chain U.
 
 0.985
DP0892
Related to 2-oxoglutarate synthase, subunit KorA.
 
 
 0.983
DP2623
Related to glutamate synthase, alpha subunit.
 
 
 0.970
DP0508
Probable glutamate synthase, large subunit; Belongs to the glutamate synthase family.
 
 
 0.969
DP0891
Probable 2-oxoglutarate synthase, subunit KorB.
 
 
 0.963
pfor
Probable pyruvate-flavodoxin oxidoreductase.
 
 
 0.958
DP2624
Related to glutamate synthase, beta subunit.
 
 
0.953
DP0481
Probable formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.944
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.