STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1016Related to methylamine utilization protein. (164 aa)    
Predicted Functional Partners:
DP1017
Unknown protein.
 
   
 0.950
DP1471
Probable heavy-metal transporting ATPase.
  
  
 0.631
DP1755
Unknown protein.
 
 
 
 0.591
DP1890
Related to ABC transporter, ATP-binding protein.
 
 
 0.510
DP1015
Similar to hydrogenase expression/formation protein (HypA).
       0.503
DP2117
Related to thiosulfate sulfurtransferase.
     
 0.475
DP0096
Probable GufA protein.
   
 0.473
DP1014
Related to hydrogenase isoenzymes formation protein; Belongs to the HypD family.
       0.447
DP0619
Hypothetical protein.
  
     0.425
DP0144
Conserved hypothetical membrane protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
 
 0.421
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.