STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1207Related to peptide ABC-transporter, permease protein. (286 aa)    
Predicted Functional Partners:
DP1208
Related to ABC transporter, ATP-binding protein.
  
 0.996
DP0150
Probable dipeptide ABC transporter, ATP-binding protein (DppD); Belongs to the ABC transporter superfamily.
  
 0.989
DP0151
Probable dipeptide ABC transporter, ATP-binding protein (DppF); Belongs to the ABC transporter superfamily.
  
 0.989
DP1206
Related to peptide ABC transporter, permease protein.
  
 0.988
DP1177
Probable oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.985
DP1205
Related to peptide ABC-transporter, periplasmic substrate binding protein.
 
 0.941
DP1179
Probable oligopeptide ABC transporter, permease protein.
  
 0.930
DP0148
Related to dipeptide ABC transporter, permease protein (DppB).
  
 0.929
DP1176
Related to oligopeptide ABC transporter, oligopeptide-binding protein.
 
 0.860
DP0989
Probable amino acid permease, ATP-binding protein.
 
    
 0.858
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.