STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1253Related to polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). (702 aa)    
Predicted Functional Partners:
DP2743
Conserved hypothetical protein.
 
  
 0.945
DP2180
Probable manganese-dependent inorganic pyrophosphatase.
     
  0.900
DP0981
Conserved hypothetical protein.
 
   
 0.707
DP1252
Conserved hypothetical protein.
 
   
 0.650
DP1251
Related to chromosome partitioning protein Soj.
 
    0.543
polA
Probable DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.538
DP1250
Hypothetical protein.
  
  
 0.530
DP3116
Probable pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.507
DP1793
Related to two-component system sensory/regulatory protein (hybrid family).
     
 0.498
purM
Probable phosphoribosyl-formylglycinamidine cyclo-ligase.
    
 0.405
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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