STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1270Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein. (252 aa)    
Predicted Functional Partners:
DP1269
Probable high-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
DP2488
Probable high-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
DP1268
Probable high-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
DP2489
Probable high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
DP2194
Related to branched-chain amino acid ABC transporter, periplasmic substrate binding protein.
 
 
 0.977
DP2490
Probable high-affinity branched-chain amino acid ABC-transporter, periplasmic substrate-binding protein [Precursor].
 
 
 0.976
DP1271
Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein.
 
  
0.943
DP1775
Related to leucine/isoleucine/valine-binding protein [precursor].
 
 
 0.931
DP1947
Related to leucine/isoleucine/valine-binding protein.
 
 
 0.928
DP2487
Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein.
  
  
 
0.905
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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