STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1357Probable DctM (C4-dicarboxylate permease, large subunit). (433 aa)    
Predicted Functional Partners:
DP1358
Probable DctQ (C4-dicarboxylate permease, small subunit).
 
   0.955
DP1359
Probable DctP (periplasmic C4-dicarboxylate binding protein).
 
    0.905
DP1189
Probable DctP (periplasmic C4-dicarboxylate binding protein).
    0.760
DP0597
Probable DctP (periplasmic C4-dicarboxylate binding protein).
    0.750
DP1188
Probable DctQ (C4-dicarboxylate permease, small subunit).
 
 
 0.750
DP0357
Probable DctP (periplasmic C4-dicarboxylate binding protein).
 
    0.734
DP1510
Probable DctP (periplasmic C4-dicarboxylate binding protein).
    0.707
DP3054
Probable DctP (periplasmic C4-dicarboxylate binding protein).
    0.640
DP3055
Probable DctP (periplasmic C4-dicarboxylate binding protein).
 
    0.633
DP1511
Probable DctQ (C4-dicarboxylate permease, small subunit).
 
 
 0.629
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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