STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1471Probable heavy-metal transporting ATPase. (816 aa)    
Predicted Functional Partners:
DP1470
Related to mercuric ion-binding protein.
  
 
 0.942
DP0504
Related to mercuric reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
  
 0.822
DP0144
Conserved hypothetical membrane protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.677
msrA-2
Probable peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
  
 0.665
DP0133
Related to cadmium efflux system accessory protein.
 
  
 0.647
DP1016
Related to methylamine utilization protein.
  
  
 0.631
DP1285
Related to nitrogen assimilation regulatory protein.
  
  
 0.628
DP0371
Probable cation efflux system protein (CzcA); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
 0.618
DPPB100
Probable transcription regulator.
  
  
 0.611
DP0810
Probable thioredoxin; Belongs to the thioredoxin family.
 
  
 0.603
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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