STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1528Hypothetical membrane protein. (283 aa)    
Predicted Functional Partners:
DP1529
Related to TadB.
 
  
0.978
DP1531
Related to septum site-determining protein (MinD).
 
  
 0.969
DP1536
Hypothetical protein.
 
  
 0.967
DP1530
Probable secretory protein kinase.
 
  
 0.950
DP1533
Unknown protein.
 
    0.929
DP1535
Conserved hypothetical protein; Belongs to the bacterial secretin family.
 
  
 0.919
DPPB12
Probable conjugal transfer protein TrbB.
 
  
 0.894
DP1527
Unknown protein.
 
  
 0.868
DP1537
Unknown protein.
 
   
 0.853
DP1540
Conserved hypothetical protein.
 
    0.852
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.