STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1539Related to pilus assembly protein pilin subunit. (61 aa)    
Predicted Functional Partners:
DP1536
Hypothetical protein.
 
  
 0.871
DP1531
Related to septum site-determining protein (MinD).
 
  
 0.793
DP1535
Conserved hypothetical protein; Belongs to the bacterial secretin family.
 
  
 0.708
DP1537
Unknown protein.
  
  
 0.664
DP1529
Related to TadB.
 
  
 0.616
DP1533
Unknown protein.
 
  
 0.609
DP1528
Hypothetical membrane protein.
 
  
 0.590
DP1530
Probable secretory protein kinase.
 
  
 0.546
DP1540
Conserved hypothetical protein.
  
    0.545
DP1527
Unknown protein.
 
  
 0.492
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.