STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1576Related to terminase large subunit of phage lambda. (657 aa)    
Predicted Functional Partners:
DP1584
Hypothetical protein.
 
  
 0.947
DP1582
Related to portal protein GPB of phage lambda.
 
  
 0.852
DP1572
Unknown protein.
 
     0.818
DP1571
Conserved hypothetical protein.
 
     0.805
DP1575
Unknown protein.
     
 0.798
DP1585
Related to predicted protein of phage Felix 01.
 
     0.791
DP1577
Unknown protein.
       0.765
DP1583
Related to capsid protein GPC of phage lambda.
 
    0.731
DP0179
Hypothetical protein, probably cold-shock inducible.
 
     0.497
DP1458
Unknown protein.
  
     0.415
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.