STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1753Hypothetical protein. (211 aa)    
Predicted Functional Partners:
DP1754
Probable ABC transporter.
 
 
 0.975
DP1755
Unknown protein.
 
  
 0.954
DP1751
Hypothetical protein.
 
    0.886
DP1749
Related to glycosyltransferase.
 
     0.881
DP1752
Unknown protein.
 
    0.881
DP1748
Hypothetical protein.
 
    0.874
lolD
Related to lipoprotein releasing system ATP-binding protein (LolD); Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 
 0.855
DP1890
Related to ABC transporter, ATP-binding protein.
 
   
 0.791
DP1784
Probable lipoprotein releasing system, ATP-binding protein (LolD).
 
 
 0.787
DP1756
Unknown protein.
       0.767
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.