STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1968Hypothetical protein. (182 aa)    
Predicted Functional Partners:
DP1966
Probable DNA mismatch repair protein MutL; Belongs to the DNA mismatch repair MutL/HexB family.
       0.791
DP1967
Related to DNA mismatch repair protein MutL.
       0.781
trmFO
Probable glucose-inhibited division protein; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.
       0.744
DP2360
Related to methyl-accepting chemotaxis protein.
  
     0.610
DP0915
Unknown protein.
  
     0.597
DP0112
Related to fimbrial assembly protein PilQ [Precursor].
  
     0.495
DP1692
Hypothetical protein.
  
     0.493
DP2213
Hypothetical protein.
  
     0.460
DP1970
Unknown protein.
       0.459
DP0072
Hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
     0.451
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.