node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DP1250 | DP1976 | DP1250 | DP1976 | Hypothetical protein. | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | 0.632 |
DP1250 | nnrE | DP1250 | DP2584 | Hypothetical protein. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.988 |
DP1645 | DP1976 | DP1645 | DP1976 | Probable peptidyl-prolyl cis-trans isomerase. | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | 0.918 |
DP1645 | atpD | DP1645 | DP0834 | Probable peptidyl-prolyl cis-trans isomerase. | Probable ATP synthase, beta chain (AtpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.549 |
DP1645 | rplC | DP1645 | DP1124 | Probable peptidyl-prolyl cis-trans isomerase. | Probable 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.910 |
DP1645 | rplM | DP1645 | DP1327 | Probable peptidyl-prolyl cis-trans isomerase. | Probable 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.909 |
DP1645 | rplO | DP1645 | DP1144 | Probable peptidyl-prolyl cis-trans isomerase. | Probable 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.887 |
DP1645 | rplX | DP1645 | DP1135 | Probable peptidyl-prolyl cis-trans isomerase. | Probable 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.885 |
DP1645 | rpsD | DP1645 | DP1151 | Probable peptidyl-prolyl cis-trans isomerase. | Probable 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.842 |
DP1976 | DP1250 | DP1976 | DP1250 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Hypothetical protein. | 0.632 |
DP1976 | DP1645 | DP1976 | DP1645 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable peptidyl-prolyl cis-trans isomerase. | 0.918 |
DP1976 | atpD | DP1976 | DP0834 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable ATP synthase, beta chain (AtpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.620 |
DP1976 | nnrE | DP1976 | DP2584 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.722 |
DP1976 | pnp | DP1976 | DP2608 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.702 |
DP1976 | rplC | DP1976 | DP1124 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.718 |
DP1976 | rplM | DP1976 | DP1327 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.676 |
DP1976 | rplO | DP1976 | DP1144 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.624 |
DP1976 | rplX | DP1976 | DP1135 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.646 |
DP1976 | rpsD | DP1976 | DP1151 | Probable ATP-independent RNA helicase (DbpA); Belongs to the DEAD box helicase family. | Probable 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.649 |
atpD | DP1645 | DP0834 | DP1645 | Probable ATP synthase, beta chain (AtpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Probable peptidyl-prolyl cis-trans isomerase. | 0.549 |