STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP2321Probable 2-ketoglutarate oxidoreductase, alpha chain. (381 aa)    
Predicted Functional Partners:
DP2319
Probable 2-ketoglutarate oxidoreductase, gamma chain.
 
 0.999
DP2320
Probable 2-ketoglutarate oxidoreductase, beta chain.
 0.998
oforB
Probable 2-oxoacid ferredoxin oxidoreductase, beta subunit.
 0.997
DP0891
Probable 2-oxoglutarate synthase, subunit KorB.
 0.994
DP2322
Related to 2-ketoglutarate oxidoreductase, delta chain.
 
  
  0.993
pfor
Probable pyruvate-flavodoxin oxidoreductase.
  
 0.993
sucC
Probable succinyl-CoA synthetase, beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
 
 0.981
sucD
Probable succinyl-CoA synthetase, alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
 
 0.981
DP1088
Probable citrate synthase; Belongs to the citrate synthase family.
   
 
 0.973
DP1199
Probable pyruvate synthase, gamma subunit.
  
 0.970
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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