STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP2419Related to serine/threonine protein kinase. (380 aa)    
Predicted Functional Partners:
DP2418
Conserved hypothetical protein.
 
 
 0.916
DP2574
Related to serine/threonine protein phosphatase.
 
 0.856
DP2570
Hypothetical protein.
 
 
 
 0.830
DP2315
Conserved hypothetical protein.
  
 0.726
DP2426
Hypothetical protein.
 
 
 
 0.620
DP2422
Hypothetical protein, probably cold-shock inducible.
  
 0.514
DP2420
Unknown protein.
       0.512
DP0883
Related to two-component system sensory/regulatory protein (hybrid family).
 
 
 0.443
DP2421
Unknown protein.
       0.433
DP2292
Related to two-component system sensory/regulatory protein (hybrid family).
  
 
 0.413
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.