Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DP0475 | DP2376 | DP0475 | DP2376 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.918 |
DP0475 | DP2547 | DP0475 | DP2547 | Conserved hypothetical protein. | Probable 8-amino-7-oxononanoate synthase (BioF). | 0.660 |
DP0475 | bioA | DP0475 | DP2548 | Conserved hypothetical protein. | Probable Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (BioA); Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.542 |
DP0475 | bioB | DP0475 | DP2549 | Conserved hypothetical protein. | Related to biotin synthetase (BioB); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.900 |
DP0475 | bioD | DP0475 | DP2544 | Conserved hypothetical protein. | Probable dethiobiotin synthase (BioD); Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.972 |
DP2376 | DP0475 | DP2376 | DP0475 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.918 |
DP2376 | DP2547 | DP2376 | DP2547 | Conserved hypothetical protein. | Probable 8-amino-7-oxononanoate synthase (BioF). | 0.660 |
DP2376 | bioA | DP2376 | DP2548 | Conserved hypothetical protein. | Probable Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (BioA); Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.542 |
DP2376 | bioB | DP2376 | DP2549 | Conserved hypothetical protein. | Related to biotin synthetase (BioB); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.900 |
DP2376 | bioD | DP2376 | DP2544 | Conserved hypothetical protein. | Probable dethiobiotin synthase (BioD); Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.972 |
DP2543 | DP2545 | DP2543 | DP2545 | Unknown protein. | Related to biotin synthesis protein (BioC). | 0.631 |
DP2543 | DP2546 | DP2543 | DP2546 | Unknown protein. | Hypothetical protein. | 0.641 |
DP2543 | DP2547 | DP2543 | DP2547 | Unknown protein. | Probable 8-amino-7-oxononanoate synthase (BioF). | 0.631 |
DP2543 | DP2550 | DP2543 | DP2550 | Unknown protein. | Related to malonyl CoA-acyl carrier protein transacylase. | 0.458 |
DP2543 | bioA | DP2543 | DP2548 | Unknown protein. | Probable Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (BioA); Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.636 |
DP2543 | bioB | DP2543 | DP2549 | Unknown protein. | Related to biotin synthetase (BioB); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.636 |
DP2543 | bioD | DP2543 | DP2544 | Unknown protein. | Probable dethiobiotin synthase (BioD); Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.719 |
DP2545 | DP2543 | DP2545 | DP2543 | Related to biotin synthesis protein (BioC). | Unknown protein. | 0.631 |
DP2545 | DP2546 | DP2545 | DP2546 | Related to biotin synthesis protein (BioC). | Hypothetical protein. | 0.992 |
DP2545 | DP2547 | DP2545 | DP2547 | Related to biotin synthesis protein (BioC). | Probable 8-amino-7-oxononanoate synthase (BioF). | 0.945 |
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