STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP2988Probable formate dehydrogenase, gamma subunit. (300 aa)    
Predicted Functional Partners:
DP2987
Probable formate dehydrogenase, iron-sulfur chain; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
 0.998
DP2986
Probable formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.997
DP1768
Probable formate dehydrogenase, beta subunit (iron-sulfur subunit).
 
 0.991
DP1769
Probable formate dehydrogenase, selenocysteine-containing chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.989
DP0481
Probable formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.953
DP0682
Probable formate dehydrogenase, alpha chain.
  
 
 0.953
DP1767
Probable formate dehydrogenase, gamma subunit (cytochrome B subunit).
  
  
 
0.908
DP1772
Related to polyferredoxins.
 
   
 0.830
DP2982
Related to ferredoxin.
 
     0.815
DP2203
Related to NAD-dependent malic enzyme.
   
 
  0.804
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.