STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP3007Hypothetical protein. (220 aa)    
Predicted Functional Partners:
DP1019
Conserved hypothetical iron-sulfur protein.
 
 
 0.996
DP3006
Conserved hypothetical iron-sulfur protein.
 
 
 0.988
DP3005
Conserved hypothetical protein.
 
 
 0.971
DP1808
Related to glycolate oxidase, iron-sulfur subunit.
 
 
 0.794
DP1021
Related to glycolate oxidase, iron-sulfur subunit (GlcF).
 
 
 0.785
ldh
Probable D-lactate dehydrogenase.
 
 
 0.718
DP0558
Probable phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.712
DP0624
Conserved hypothetical protein.
  
 
 0.702
DP3004
Unknown protein.
       0.544
ackA
Probable acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.541
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.