STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPB16Probable conjugal transfer protein TrbL. (477 aa)    
Predicted Functional Partners:
DPPB14
Probable conjugal transfer protein TrbE.
 
  
 0.993
DPPB20
Probable conjugal transfer protein TrbI.
 
  
 0.993
DPPB17
Probable conjugal transfer protein TrbF.
 
  
 0.992
DPPB18
Probable conjugal transfer protein TrbG.
 
  
 0.992
DPPB12
Probable conjugal transfer protein TrbB.
 
  
 0.987
DPPB15
Probable conjugal transfer protein TrbJ.
    
 0.960
DPPB13
Probable conjugal transfer protein TrbC.
    
 0.957
DPPB22
Related to DNA primase TraC.
 
     0.930
DPPB23
Probable TraG protein, N-terminal part.
 
   
 0.918
DPPB25
Probable conjugal transfer protein TraF precursor.
 
   
 0.907
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.