STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPB41Predicted orf. (81 aa)    
Predicted Functional Partners:
DP2209
Probable NADH dehydrogenase (ubiquinone) I, chain F.
   
 0.982
DPPB37
Probable acetyl-CoA synthetase.
 
   
 0.945
DPPB40
Probable pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase.
 
 
 0.942
DP2404
Similar to acyl carrier protein.
  
  
 
0.913
DP2093
Related to acyl carrier protein.
  
  
 
0.901
DP1850
Related to acyl-carrier protein.
     
  0.900
acpP
Related to acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
  0.900
acpP-2
Probable acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
  0.900
DP1319
Probable NADH dehydrogenase, subunit 9.
   
 0.870
DP2550
Related to malonyl CoA-acyl carrier protein transacylase.
  
 0.866
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.