STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPPB86Related to capsular polysaccharide export protein. (285 aa)    
Predicted Functional Partners:
DPPB85
Related to exopolysaccharide biosynthesis protein (GumC protein).
 
 
 0.990
DPPB91
Related to UDP-galactose-lipid carrier transferase.
 
  
 0.982
DPPB84
Related to capsular polysaccharide biosynthesis protein.
 
 
 0.938
DPPB82
Related to polysaccharide transport proteins.
 
  
 0.831
DPPB87
Hypothetical protein.
       0.773
DP2926
Probable mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.767
DP0030
Probable galactosyltransferase.
 
  
 0.760
DP0048
Related to lipopolysaccharide biosynthesis protein (WbpM).
  
  
 0.676
DP2935
Conserved hypothetical membrane protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.639
DP2816
Hypothetical protein.
   
    0.507
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.