STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001586775_00869Unannotated protein. (640 aa)    
Predicted Functional Partners:
GCA_001586775_00874
Unannotated protein.
 
  
  0.947
GCA_001586775_00868
Unannotated protein.
 
     0.939
GCA_001586775_00870
Unannotated protein.
 
     0.932
GCA_001586775_00871
Unannotated protein.
 
     0.862
GCA_001586775_00310
Unannotated protein.
  
  0.854
GCA_001586775_00873
Unannotated protein.
 
     0.842
GCA_001586775_00492
Unannotated protein.
  
  0.840
GCA_001586775_00875
Unannotated protein.
 
  
  0.830
GCA_001586775_00450
Unannotated protein.
  
 
  0.810
GCA_001586775_00309
Unannotated protein.
  
 
  0.801
Your Current Organism:
Sphingobacterium sp. CFCC11742
NCBI taxonomy Id: 1775560
Other names: S. sp. CFCC 11742, Sphingobacterium sp. CFCC 11742
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.