STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgBGlycogen-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (734 aa)    
Predicted Functional Partners:
glgA
Hypothetical protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.991
OPL18907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 0.975
OPL18063.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
OPL17690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.886
OPL19908.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.839
OPL18379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.810
OPL18618.1
Hypothetical protein; Acts as a magnesium transporter.
       0.773
OPL18620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OPL18621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OPL18622.1
Secondary thiamine-phosphate synthase enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
Your Current Organism:
Aegiribacteria bacterium MLSC
NCBI taxonomy Id: 1775674
Other names: C. Aegiribacteria bacterium MLS_C, Candidatus Aegiribacteria bacterium MLS_C, bacterium MLS_C
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