STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selAHypothetical protein; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (464 aa)    
Predicted Functional Partners:
OPL17917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
OPL18005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.940
rnfB
Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
       0.781
OPL19712.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.728
OPL18472.1
Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.653
rnfA
Electron transport complex subunit A; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
     
 0.632
OPL19005.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.611
OPL18673.1
Hydrogenase expression/formation protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.594
OPL17915.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.578
OPL17916.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
Your Current Organism:
Aegiribacteria bacterium MLSC
NCBI taxonomy Id: 1775674
Other names: C. Aegiribacteria bacterium MLS_C, Candidatus Aegiribacteria bacterium MLS_C, bacterium MLS_C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.