STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yycNPutative N-acetyltransferase YycN. (156 aa)    
Predicted Functional Partners:
KZE92872.1
Putative multidrug-efflux transporter.
  
     0.593
KZE92584.1
Hypothetical protein.
       0.555
KZE92904.1
Hypothetical protein.
  
 
  0.509
mccF
Microcin C7 self-immunity protein MccF.
  
 
  0.499
tsaB
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
 
  0.462
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
  
  0.453
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.446
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
       0.443
pbpG
D-alanyl-D-alanine endopeptidase.
  
     0.419
desV
dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
   
  0.411
Your Current Organism:
Agromyces sp. NDB4Y10
NCBI taxonomy Id: 1775951
Other names: A. sp. NDB4Y10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.