STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rspR_2HTH-type transcriptional repressor RspR. (224 aa)    
Predicted Functional Partners:
KZE89159.1
Hypothetical protein.
 
     0.838
KZE88408.1
Putative HTH-type transcriptional regulator.
  
     0.769
mcbR_1
HTH-type transcriptional regulator McbR.
  
     0.767
rspR_5
HTH-type transcriptional repressor RspR.
  
     0.767
gntR_1
Putative D-xylose utilization operon transcriptional repressor.
  
     0.766
rspR_4
HTH-type transcriptional repressor RspR.
  
     0.765
rspR_1
HTH-type transcriptional repressor RspR.
  
     0.760
pdhR
Pyruvate dehydrogenase complex repressor.
  
  
 0.708
mcbR_2
HTH-type transcriptional regulator McbR.
  
     0.673
folD
Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.605
Your Current Organism:
Microbacterium sp. TNHR37B
NCBI taxonomy Id: 1775956
Other names: M. sp. TNHR37B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.