STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODQ89229.1UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)    
Predicted Functional Partners:
ODQ89182.1
Protein tyrosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
ODQ89184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.996
ODQ90183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.993
ODQ90185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.993
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.954
ODQ89200.1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.944
ODQ88975.1
Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.912
ODQ89674.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.911
ODQ88261.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.911
ODQ87116.1
Galactofuranosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.911
Your Current Organism:
Mycolicibacterium flavescens
NCBI taxonomy Id: 1776
Other names: ATCC 14474, CCUG 29041, CIP 104533, DSM 43991, JCM 12274, Mycobacterium flavescens, NCTC 10271, NRRL B-4038
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.