STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODQ88712.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (698 aa)    
Predicted Functional Partners:
ODQ88713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
ODQ88955.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.470
ODQ88819.1
SAM-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.455
ODQ88706.1
Na+/H+ antiporter subunit G; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
ODQ88707.1
Subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
ODQ88708.1
Na+/H+ antiporter subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
ODQ88709.1
Na+/H+ antiporter subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
ODQ88710.1
Na(+)/H(+) antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
ODQ88711.1
Na+/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
Your Current Organism:
Mycolicibacterium flavescens
NCBI taxonomy Id: 1776
Other names: ATCC 14474, CCUG 29041, CIP 104533, DSM 43991, JCM 12274, Mycobacterium flavescens, NCTC 10271, NRRL B-4038
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.