Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BHQ18_20780 | ODQ88123.1 | BHQ18_20780 | BHQ18_20785 | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. | 0.474 |
BHQ18_20780 | ODQ88158.1 | BHQ18_20780 | BHQ18_20105 | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
BHQ18_20780 | ODQ88726.1 | BHQ18_20780 | BHQ18_17860 | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
BHQ18_20780 | ODQ89104.1 | BHQ18_20780 | BHQ18_16025 | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
ODQ88123.1 | BHQ18_20780 | BHQ18_20785 | BHQ18_20780 | Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
ODQ88158.1 | BHQ18_20780 | BHQ18_20105 | BHQ18_20780 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
ODQ88726.1 | BHQ18_20780 | BHQ18_17860 | BHQ18_20780 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
ODQ89104.1 | BHQ18_20780 | BHQ18_16025 | BHQ18_20780 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |