STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX28284.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
CUX28273.1
Type IV secretory system Conjugative DNA transfer.
 
     0.778
CUX28277.1
Hypothetical protein.
       0.773
mreC
Cell shape-determining protein MreC precursor; Involved in formation and maintenance of cell shape.
  
  
 0.768
maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.761
CUX28266.1
Hypothetical protein.
       0.731
xerC_1
Tyrosine recombinase XerC.
 
     0.687
CUX29113.1
DNA utilization protein GntX.
  
    0.667
CUX28301.1
Hypothetical protein.
 
     0.660
CUX28258.1
Hypothetical protein; SNF2 family N-terminal domain.
 
     0.620
rluC
Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.
  
    0.583
Your Current Organism:
Clostridium sp. C105KSO13
NCBI taxonomy Id: 1776045
Other names: C. sp. C105KSO13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.