STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001541925_00542Unannotated protein. (675 aa)    
Predicted Functional Partners:
GCA_001541925_01700
Unannotated protein.
 
      0.841
GCA_001541925_00465
Unannotated protein.
    
  0.724
GCA_001541925_00543
Unannotated protein.
       0.655
GCA_001541925_00271
Unannotated protein.
    
  0.615
GCA_001541925_00544
Unannotated protein.
       0.516
GCA_001541925_01688
Unannotated protein.
    
  0.448
Your Current Organism:
Nitrosopumilus sp. Nsub
NCBI taxonomy Id: 1776294
Other names: N. sp. Nsub
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.