STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysSHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (526 aa)    
Predicted Functional Partners:
KUO40873.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.900
KUO39407.1
Hypothetical protein; Catalyzes the reversible phosphorylation of UMP to UDP.
     0.826
nusG
Transcription elongation factor Spt5; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
  
    0.621
KUO40732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
cmk
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
KUO39390.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.407
tyrS
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
   
  
 0.406
Your Current Organism:
Hadesarchaea archaeon
NCBI taxonomy Id: 1776334
Other names: H. archaeon YNP_45, Hadesarchaea archaeon YNP_45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.