STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO42645.1Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
KUO42623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.953
gcvH
Hypothetical protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 0.832
KUO41294.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.678
KUO42622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.638
KUO42624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
KUO42646.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
KUO39403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.548
KUO42621.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.531
KUO41296.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.518
KUO42625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
Your Current Organism:
Hadesarchaea archaeon
NCBI taxonomy Id: 1776334
Other names: H. archaeon YNP_45, Hadesarchaea archaeon YNP_45
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