STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900021165_00440Unannotated protein. (132 aa)    
Predicted Functional Partners:
GCA_900021165_01861
Unannotated protein.
 
 
 0.991
GCA_900021165_00782
Unannotated protein.
  
 
 0.957
GCA_900021165_04380
Unannotated protein.
  
  
  0.917
GCA_900021165_01230
Unannotated protein.
    
 0.915
GCA_900021165_03194
Unannotated protein.
 
 
 0.911
GCA_900021165_03584
Unannotated protein.
   
    0.794
GCA_900021165_04358
Unannotated protein.
  
 
 0.793
GCA_900021165_00439
Unannotated protein.
       0.697
GCA_900021165_02910
Unannotated protein.
 
   
 0.668
GCA_900021165_02602
Unannotated protein.
 
  
 0.636
Your Current Organism:
Paenibacillus phocaensis
NCBI taxonomy Id: 1776378
Other names: CSUR P2238, DSM 101777, P. phocaensis, Paenibacillus sp. mt24, strain mt24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.