STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900021165_00447Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_900021165_01741
Unannotated protein.
  
 
 
 0.906
GCA_900021165_01055
Unannotated protein.
 
 
   0.904
GCA_900021165_01072
Unannotated protein.
 
 
   0.891
GCA_900021165_02341
Unannotated protein.
 
 
 
 0.889
GCA_900021165_01065
Unannotated protein.
 
 
   0.886
GCA_900021165_03617
Unannotated protein.
 
 
 
 0.884
GCA_900021165_00416
Unannotated protein.
  
   0.881
GCA_900021165_01083
Unannotated protein.
   
   0.879
GCA_900021165_02346
Unannotated protein.
   
 
 0.878
GCA_900021165_01104
Unannotated protein.
  
 
 0.877
Your Current Organism:
Paenibacillus phocaensis
NCBI taxonomy Id: 1776378
Other names: CSUR P2238, DSM 101777, P. phocaensis, Paenibacillus sp. mt24, strain mt24
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.