STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900021165_00612Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_900021165_04351
Unannotated protein.
  
 
  0.815
GCA_900021165_03636
Unannotated protein.
 
 
 0.808
GCA_900021165_01466
Unannotated protein.
    
 0.757
GCA_900021165_03489
Unannotated protein.
    
 0.757
GCA_900021165_04698
Unannotated protein.
    
  0.683
GCA_900021165_01396
Unannotated protein.
  
 
  0.646
GCA_900021165_03389
Unannotated protein.
   
 
 0.617
GCA_900021165_00610
Unannotated protein.
 
     0.611
GCA_900021165_01136
Unannotated protein.
    
  0.597
GCA_900021165_00575
Unannotated protein.
    
  0.594
Your Current Organism:
Paenibacillus phocaensis
NCBI taxonomy Id: 1776378
Other names: CSUR P2238, DSM 101777, P. phocaensis, Paenibacillus sp. mt24, strain mt24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.