STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900048895_01132Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_900048895_00412
Unannotated protein.
 
 0.887
GCA_900048895_01133
Unannotated protein.
       0.671
GCA_900048895_01134
Unannotated protein.
       0.671
GCA_900048895_02053
Unannotated protein.
  
 
 0.518
GCA_900048895_01135
Unannotated protein.
       0.499
GCA_900048895_01131
Unannotated protein.
       0.479
GCA_900048895_01119
Unannotated protein.
    
 0.474
GCA_900048895_01130
Unannotated protein.
       0.464
GCA_900048895_00106
Unannotated protein.
   
 
 0.463
GCA_900048895_01122
Unannotated protein.
   
   0.447
Your Current Organism:
Neglecta timonensis
NCBI taxonomy Id: 1776382
Other names: CSUR P2265, Clostridium sp. SN17, DSM 102082, N. timonensis, strain SN17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.