STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900048895_02338Unannotated protein. (376 aa)    
Predicted Functional Partners:
GCA_900048895_02354
Unannotated protein.
 
 0.996
GCA_900048895_02337
Unannotated protein.
 
    0.811
GCA_900048895_00493
Unannotated protein.
   
  
 0.592
GCA_900048895_01964
Unannotated protein.
   
  
 0.592
GCA_900048895_02288
Unannotated protein.
  
  
 0.524
GCA_900048895_00520
Unannotated protein.
  
  
 0.518
GCA_900048895_01673
Unannotated protein.
  
    0.475
GCA_900048895_02098
Unannotated protein.
  
   0.473
GCA_900048895_00077
Unannotated protein.
  
    0.460
GCA_900048895_03211
Unannotated protein.
 
    0.449
Your Current Organism:
Neglecta timonensis
NCBI taxonomy Id: 1776382
Other names: CSUR P2265, Clostridium sp. SN17, DSM 102082, N. timonensis, strain SN17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.