STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900048895_02461Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_900048895_02459
Unannotated protein.
       0.762
GCA_900048895_02460
Unannotated protein.
       0.762
GCA_900048895_02462
Unannotated protein.
       0.625
GCA_900048895_01958
Unannotated protein.
  
 0.509
GCA_900048895_02315
Unannotated protein.
 
  
  0.448
GCA_900048895_02058
Unannotated protein.
  
  
 0.445
GCA_900048895_02977
Unannotated protein.
  
  
  0.440
GCA_900048895_02236
Unannotated protein.
   
 0.436
GCA_900048895_02290
Unannotated protein.
    
   0.430
GCA_900048895_01798
Unannotated protein.
 
    0.428
Your Current Organism:
Neglecta timonensis
NCBI taxonomy Id: 1776382
Other names: CSUR P2265, Clostridium sp. SN17, DSM 102082, N. timonensis, strain SN17
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.