STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900048895_03251Unannotated protein. (331 aa)    
Predicted Functional Partners:
GCA_900048895_03250
Unannotated protein.
 
 0.988
GCA_900048895_03249
Unannotated protein.
 0.983
GCA_900048895_03252
Unannotated protein.
 0.979
GCA_900048895_03248
Unannotated protein.
 
 
 0.972
GCA_900048895_01650
Unannotated protein.
 
 0.940
GCA_900048895_01318
Unannotated protein.
   
 
 0.923
GCA_900048895_02720
Unannotated protein.
 
 0.919
GCA_900048895_00133
Unannotated protein.
 
 0.918
GCA_900048895_01652
Unannotated protein.
 0.914
GCA_900048895_01649
Unannotated protein.
 0.844
Your Current Organism:
Neglecta timonensis
NCBI taxonomy Id: 1776382
Other names: CSUR P2265, Clostridium sp. SN17, DSM 102082, N. timonensis, strain SN17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.