STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DW099_09770Unannotated protein; Belongs to the SEDS family. (367 aa)    
Predicted Functional Partners:
DW099_09815
Unannotated protein.
 
 0.953
DW099_03635
Unannotated protein.
 
 0.944
DW099_09780
Unannotated protein.
 
 0.942
murC
Unannotated protein; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.899
DW099_03670
Unannotated protein; Essential cell division protein.
  
 
 0.894
murD
Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 0.876
murG
Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.867
mraY
Unannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.860
DW099_14765
Unannotated protein.
 
 0.835
DW099_15595
Unannotated protein.
 
 
 0.827
Your Current Organism:
Emergencia timonensis
NCBI taxonomy Id: 1776384
Other names: CSUR P2260, DSM 101844, Eubacterium sp. SN18, strain SN18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.