STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176615_00108Unannotated protein. (347 aa)    
Predicted Functional Partners:
GCA_900176615_02158
Unannotated protein.
   
 0.996
GCA_900176615_00493
Unannotated protein.
 
 0.991
GCA_900176615_00482
Unannotated protein.
  
 0.977
GCA_900176615_01388
Unannotated protein.
 
 
 0.953
GCA_900176615_00772
Unannotated protein.
   
 
 0.927
GCA_900176615_00952
Unannotated protein.
  
 0.847
GCA_900176615_00063
Unannotated protein.
    
 0.841
GCA_900176615_00681
Unannotated protein.
   
 
 0.837
GCA_900176615_00934
Unannotated protein.
   
 
 0.837
GCA_900176615_01409
Unannotated protein.
   
 
 0.837
Your Current Organism:
Clostridium massiliodielmoense
NCBI taxonomy Id: 1776385
Other names: C. massiliodielmoense, CCUG 69893, CSUR P2255, Clostridium sp. MT26, strain MT26
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.