STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176615_00615Unannotated protein. (227 aa)    
Predicted Functional Partners:
GCA_900176615_00614
Unannotated protein.
 
 0.986
GCA_900176615_02185
Unannotated protein.
 0.985
GCA_900176615_01504
Unannotated protein.
 
 0.941
GCA_900176615_01372
Unannotated protein.
 
 0.932
GCA_900176615_01147
Unannotated protein.
 
 0.904
GCA_900176615_02091
Unannotated protein.
 
 
 0.879
GCA_900176615_02187
Unannotated protein.
  
 0.877
GCA_900176615_01106
Unannotated protein.
  
 0.876
GCA_900176615_02458
Unannotated protein.
 
   
  0.873
GCA_900176615_01107
Unannotated protein.
   
 0.830
Your Current Organism:
Clostridium massiliodielmoense
NCBI taxonomy Id: 1776385
Other names: C. massiliodielmoense, CCUG 69893, CSUR P2255, Clostridium sp. MT26, strain MT26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.